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共性关键技术创新平台主任2

发布时间:2015-09-07 文章出处:       文章作者:       浏览次数:

        职       务:共性关键技术创新平台主任

        姓       名:张文利

        学       历:博士

        研究领域:植物表观遗传及其表观基因组学

        联系方式:

        Email:wzhang25@njau.edu.cn


        教授,博导。 2005年在中国科学院遗传与发育生物学研究所获遗传学博士学位。2006.4-2008.12 在美国威斯康辛大学-麦迪逊分校园艺系(Horticulture Department,University of Wisconsin-Madison)从事博士后 (Research Associate)。 2009.1-2012.11作为副研究员 (Associate Scientist) 继续在美国威斯康辛大学-麦迪逊分校园艺系工作。2012年12月作为高层次人才受聘于南京农业大学农学院作物遗传与种质创新国家重点实验室。2014年,被聘为美国威斯康辛大学-麦迪逊分校园艺系的“Honorary Associate/Fellow”。目前在《Plant Physiology》、《Plant Cell》、《Genome Research》、《PNAS》、《Chromosoma》等杂志上公开发表第一作者或共同第一作者论文12篇。参编学术专著三篇,以受邀报告人身份参加国际会议(PAG,Plant & Animal Genomic Conference)两次。2013年获得美国威斯康辛大学农业与生命科学学院2012-2013年度“杰出研究人员奖”(Academic Staff Excellence in Research Awards)。2014年受邀作为美国NSF“植物基因组项目(Plant Genome)”评审人。

目前主要研究兴趣:

植物功能性DNA元件的功能分析及其应用。

作物对逆境(盐和冷)胁迫响应的表观基础。

作物DNA损伤及修复热点形成的遗传及表观遗传基础。

发表性研究论文:

Zhang WL, Zhang T, Wu YF, Jiang JM (2014). Open chromatin in plant genomes. Cytogenetic and Genome Research.143(1-3):18-27.

Zhang T*, Talbert PB*, Zhang WL*, Wu YF, Yang ZJ, Henikoff J, Henikoff S, Jiang JM. 2013. The CentO satellites confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres. Proc. Natl. Acad. Sci. USA E4875–E4883 (*Co-first author).

Yi CD*, Zhang WL*, Dai XB, Li X, Gong ZY, Zhou Y, Liang GH, Gu MH. 2013. Identification and diversity of functional centromere satellite in the wild rice species Oryza brachyantha. Chromosome Res. 21(8):725-37. (*Co-first author).

Zhang WL, Zhang T, Wu YF, and Jiang JM. 2012b. Genome wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis thaliana. Plant Cell, 24: 2719-2731

Zhang WL, Wu YF, Schnable JC, Zeng ZX, Freeling M, Crawford GE, and Jiang JM. 2012a.High-resolution mapping of open chromatin in the rice genome. Genome Res. 22: 151-162.

Zhang WL, Friebe B, Gill BS, and Jiang JM. 2010. Centromere inactivation and epigenetic modifications of a plant chromosome with three functional centromeres. Chromosoma 119: 553-63.

Zhang WL, Wai C, Ming R, Yu Q, and Jiang J. 2010. Integration of genetic and cytological maps and development of a pachytene chromosome-based karyotype in papaya. Tropical Plant Biology 3: 166-70.

Lu JY*, Zhang WL *, Xue H, Pan Y, Zhang CH, He XH, and Liu M. 2010. Changes in AFLP and SSR DNA polymorphisms induced by short-term space flight of rice seeds. Biol. Plantarum 54: 112-116. (*Co-first author)

Zhang WL, Wang XE, Yu QY, Ming R, and Jiang JM. 2008.DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya. Genome Res. 18: 1938-1943.

Zhang WL, Lee H-R, Koo D-K, Jiang JM. 2008. Epigenetic modification of centromeric chromatin: Hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize. Plant Cell 20: 25-34.

Zhang WL, Yi CD, Bao WD, Liu B, Cui JJ, Yu HX, Cao XF, Gu MH, Min Liu, and Cheng ZK. 2005. The Transcribed 165-bp CentO is the major functional centromeric element in the wild rice species Oryza punctata. Plant Physiol. 139: 306-315. 

参编的书本章节:

Zhang WL and Jiang JM (2015). Genome-wide mapping of DNaseI hypersensitive sites in plants.  In: Methods in Molecular Biology:Plant Functional Genomics. 1284:71-89. doi: 10.1007/978-1-4939-2444-8_4.

Zhang WL and Jiang JM (2014) Molecular Cytogenetics of Papaya. In: Genetics and Genomics of Papaya. Ray M and Moore P (ed.) Springer p157-167, ISBN: 978-1-4614-8086-0 (Print) 978-1-4614-8087-7

Walling JG, Zhang WL, and Jiang JM. (2013) Fluorescence in situ hybridization techniques in rice. In: Methods in Molecular Biology: Rice Protocols. Y. Yang (ed.). The Humana Press Inc. Volume 956, 2013, pp 13-27